Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015848284.1_cds_XP_016510331.1_23179
CDS Infomation

[gene=LOC107827660] [db_xref=GeneID:107827660] [protein=DEAD-box ATP-dependent RNA helicase 52B-like] [protein_id=XP_016510331.1] [location=join(19913..20380,20497..20580,21527..21769,22052..22219,22315..22428,23003..23539)] [gbkey=CDS]
Sequence

ATGAGTATGCCATGGAATGGTTCTTATACCGAGTCAACTCGCTCCAGTCGTTCTACTCGA
CCCACTTACCTCCCTCCTCACCTGCGGAACCCATCGCTTCCACCTTCAAATGTTGAACAA
CTGAATATAAATGCATATGATGATGTTCCAGTAGAGGTTACTGGGGCTGATATTCCGGAG
CCACTCTCGTCCTTTTCGGAAATTGGTGACTTGTATGATAACATAAGGAGGTGCAACTAT
GTGAAGCCAACGCCGATTCAGCGATACGCAATACCAGTCGGAATGGCGGGGAGAGACATG
ATGGCTTGTGCTCAGACGGGTTCAGGGAAAACGGCCGCGTTTTGCCTTCCCATTATCAGT
GGGATTTTGAAGGACAAAAGAACTACTAGTACTAGTACAAGGGGAAGGGGGGGTTGCGCT
TTTCCTCTTGCTCTCATACTCTCTCCTACTAGAGAGTTGTCTTGTCAGATACATGAAGAG
GCGAAGAAGTTCTCTTACTTGACAGGATTGAAGGTTGTGGTTGTATATGGAGGAGCACCC
ATAATTCCTCAGTTAGGCAATCTGGAAAAGGGTGTTGACATTTTAGTTGCCACACCTGGG
CGCTTGGTGGACATGATAGAGAAATCAAGAGTTTCCTTACAAGCAGTGAAATATTTGGCC
TTAGATGAAGCTGATCGGATGCTTGACATGGGCTTTGAGCCCCAAGTTCGTAAGATTGTT
CAGAAAATGAAGATGCCCCCACCTGGTAGAAGGCAGACAATGCTTTTTAGTGCAACATTT
CCAACTGAGATACAGAGGCTTGCATCGGATTTTCTTTCAAACTACATCTTCTTGGCGGCT
GGAAAAGTTGGGTCCAGCACTGATCTAATAGTTCAAAAAGTTGAGTTTGTTCCTGATACG
GACAAGAAGGATCATTTACTGAATCTTCTTCATGCTCAACATTCAAATCAAATGGATGCA
AAGCTGGCTTTGACTCTAATATTTGTGGAGACCAAAAGAGGAGCAGATACATTAGAACGT
TGGTTGGTCAGGAGTGGTATCCCGTCTATTGCCATTCATGGTGATAAAATGCAGTTTGAG
AGAGAACGAGCGCTAAAATCATTTAAAAGTGGACAAACTCCTGTTTTAGTTGCAACTGAT
GTAGCTGCTCGCGGTCTGGATGTTCCAAATGTTGCTCATGTCATAAATTTTGACTTGCCA
AGGAACATAGATGACTATGTACACAGAATTGGACGAACAGGTCGTGCTGGTAAATCTGGA
TTGGCAACTGCATTTTTCAATGACAAGAATGTGCCTTTGGCAAAGGATCTTGTTGAATTG
ATGCAGGGGGCAAATCAAGAAATTCCTAATTGGCTGAGTGAATATGCTGAAACATGTTAC
AGCAGTGATGGTGCTAGAACGAGTCGCTATGTTGGAAGTAAGTTCGGGGGCTATGATTAC
AGGAGTGTTTCCTTCCATAGTGGTAGTGGAAACTACTCTAGCCAGTTTGCTGATACAGAA
GATGCTACTCATTATGCTGTGTCCGCTAGCGCTTTCACCTACGGTGCTCCTTTTGCAGCG
GGTTGTTATGGTCCTTCTGAAATGGACTCCTTTCCTGCTGCTTCATACCGTTAA

Peptide Sequence

PEP ID

XP_016510331.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 52B-like [Nicotiana tabacum]
Sequence

MSMPWNGSYTESTRSSRSTRPTYLPPHLRNPSLPPSNVEQLNINAYDDVPVEVTGADIPE
PLSSFSEIGDLYDNIRRCNYVKPTPIQRYAIPVGMAGRDMMACAQTGSGKTAAFCLPIIS
GILKDKRTTSTSTRGRGGCAFPLALILSPTRELSCQIHEEAKKFSYLTGLKVVVVYGGAP
IIPQLGNLEKGVDILVATPGRLVDMIEKSRVSLQAVKYLALDEADRMLDMGFEPQVRKIV
QKMKMPPPGRRQTMLFSATFPTEIQRLASDFLSNYIFLAAGKVGSSTDLIVQKVEFVPDT
DKKDHLLNLLHAQHSNQMDAKLALTLIFVETKRGADTLERWLVRSGIPSIAIHGDKMQFE
RERALKSFKSGQTPVLVATDVAARGLDVPNVAHVINFDLPRNIDDYVHRIGRTGRAGKSG
LATAFFNDKNVPLAKDLVELMQGANQEIPNWLSEYAETCYSSDGARTSRYVGSKFGGYDY
RSVSFHSGSGNYSSQFADTEDATHYAVSASAFTYGAPFAAGCYGPSEMDSFPAASYR

Transcript Sequence

Gene sequence data has not been registered.